STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65307.1Transcriptional regulator, GntR family; KEGG: lci:LCK_00041 0.00075 transcriptional regulator K07979; Psort location: Cytoplasmic, score: 8.96. (467 aa)    
Predicted Functional Partners:
KXK65305.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
 
   0.892
KXK65304.1
Hypothetical protein.
 
 
   0.875
KXK65306.1
PAS domain S-box protein; KEGG: fsc:FSU_1642 4.2e-124 sensor histidine kinase/response regulator; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.874
KXK66236.1
Diguanylate cyclase domain protein; KEGG: swp:swp_1405 4.4e-48 response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain-containing protein K07814; Psort location: CytoplasmicMembrane, score: 7.88.
  
   
 0.753
KXK64288.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.753
KXK66797.1
Diguanylate cyclase domain protein; KEGG: bmq:BMQ_1426 2.8e-22 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; Psort location: Cytoplasmic, score: 8.96.
  
     0.752
KXK65696.1
Diguanylate cyclase domain protein; KEGG: bpb:bpr_I1469 4.4e-26 two component system histidine kinase/response regulator hybrid protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
   
 0.742
KXK64555.1
KEGG: awo:Awo_c32690 8.4e-16 diguanylate cyclase precursor; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.741
KXK64668.1
KEGG: ppb:PPUBIRD1_4147 3.2e-42 Diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 7.88.
  
     0.740
KXK64790.1
ABC transporter, solute-binding protein; KEGG: awo:Awo_c32680 8.0e-104 prx; peroxiredoxin precursor K05813.
 
 
   0.729
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.