Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KXK65308.1 | KXK65309.1 | HMPREF3293_01898 | HMPREF3293_01899 | Hypothetical protein. | Hypothetical protein. | 0.572 |
KXK65308.1 | KXK65310.1 | HMPREF3293_01898 | HMPREF3293_01900 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXK65308.1 | KXK65311.1 | HMPREF3293_01898 | HMPREF3293_01901 | Hypothetical protein. | Hypothetical protein. | 0.574 |
KXK65308.1 | KXK65312.1 | HMPREF3293_01898 | HMPREF3293_01902 | Hypothetical protein. | SIS domain protein; KEGG: hip:CGSHiEE_02570 2.1e-25 N-acetylmannosamine kinase; Psort location: Cytoplasmic, score: 9.97. | 0.574 |
KXK65308.1 | KXK65313.1 | HMPREF3293_01898 | HMPREF3293_01903 | Hypothetical protein. | Putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit; KEGG: toc:Toce_1432 3.3e-91 dehydrogenase E1 component; K00161 pyruvate dehydrogenase E1 component subunit alpha; Psort location: Cytoplasmic, score: 9.97. | 0.574 |
KXK65308.1 | KXK65314.1 | HMPREF3293_01898 | HMPREF3293_01904 | Hypothetical protein. | KEGG: toc:Toce_1431 4.2e-107 transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta; Psort location: Cytoplasmic, score: 9.97. | 0.574 |
KXK65308.1 | KXK65315.1 | HMPREF3293_01898 | HMPREF3293_01905 | Hypothetical protein. | Hypothetical protein. | 0.533 |
KXK65308.1 | KXK65316.1 | HMPREF3293_01898 | HMPREF3293_01906 | Hypothetical protein. | Hypothetical protein. | 0.533 |
KXK65308.1 | hflX | HMPREF3293_01898 | HMPREF3293_01907 | Hypothetical protein. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.533 |
KXK65309.1 | KXK65308.1 | HMPREF3293_01899 | HMPREF3293_01898 | Hypothetical protein. | Hypothetical protein. | 0.572 |
KXK65309.1 | KXK65310.1 | HMPREF3293_01899 | HMPREF3293_01900 | Hypothetical protein. | Hypothetical protein. | 0.572 |
KXK65309.1 | KXK65311.1 | HMPREF3293_01899 | HMPREF3293_01901 | Hypothetical protein. | Hypothetical protein. | 0.435 |
KXK65309.1 | KXK65312.1 | HMPREF3293_01899 | HMPREF3293_01902 | Hypothetical protein. | SIS domain protein; KEGG: hip:CGSHiEE_02570 2.1e-25 N-acetylmannosamine kinase; Psort location: Cytoplasmic, score: 9.97. | 0.435 |
KXK65309.1 | KXK65313.1 | HMPREF3293_01899 | HMPREF3293_01903 | Hypothetical protein. | Putative TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit; KEGG: toc:Toce_1432 3.3e-91 dehydrogenase E1 component; K00161 pyruvate dehydrogenase E1 component subunit alpha; Psort location: Cytoplasmic, score: 9.97. | 0.435 |
KXK65309.1 | KXK65314.1 | HMPREF3293_01899 | HMPREF3293_01904 | Hypothetical protein. | KEGG: toc:Toce_1431 4.2e-107 transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta; Psort location: Cytoplasmic, score: 9.97. | 0.435 |
KXK65309.1 | KXK65315.1 | HMPREF3293_01899 | HMPREF3293_01905 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXK65309.1 | KXK65316.1 | HMPREF3293_01899 | HMPREF3293_01906 | Hypothetical protein. | Hypothetical protein. | 0.407 |
KXK65309.1 | hflX | HMPREF3293_01899 | HMPREF3293_01907 | Hypothetical protein. | GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. | 0.407 |
KXK65310.1 | KXK65308.1 | HMPREF3293_01900 | HMPREF3293_01898 | Hypothetical protein. | Hypothetical protein. | 0.773 |
KXK65310.1 | KXK65309.1 | HMPREF3293_01900 | HMPREF3293_01899 | Hypothetical protein. | Hypothetical protein. | 0.572 |
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