STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65337.1KEGG: apb:SAR116_0666 2.0e-29 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0758 family. (254 aa)    
Predicted Functional Partners:
MreC
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
  
 0.770
KXK65227.1
comF family protein; KEGG: nde:NIDE1089 1.4e-17 putative phosphoribosyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
    0.767
Maf
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.738
cinA
Competence/damage-inducible protein CinA domain protein; KEGG: cco:CCC13826_0279 5.2e-19 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
     
 0.676
KXK65768.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.635
DprA
DNA protecting protein DprA; KEGG: pfe:PSF113_0071 2.6e-34 smf; protein Smf K04096; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.629
KXK65174.1
Putative DNA internalization competence protein ComEC/Rec2-like protein; KEGG: apb:SAR116_0501 1.7e-10 DNA uptake protein ComEC K02238; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.605
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
 
   
 0.590
mutL
DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.589
KXK65336.1
Hypothetical protein.
       0.572
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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