STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
birAbiotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. (321 aa)    
Predicted Functional Partners:
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.953
KXK64233.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: dku:Desku_2317 1.4e-69 Radical SAM domain-containing protein; K01012 biotin synthetase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.953
KXK64534.1
KEGG: pau:PA14_64100 3.5e-23 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160.
 
 
 
 0.940
AccC
acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.919
TsaB
Universal bacterial protein YeaZ; KEGG: cce:Ccel_0800 7.0e-34 peptidase M22 glycoprotease; K14742 hypothetical protease.
 
    0.895
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.894
KXK65104.1
Putative methylmalonyl-CoA carboxyltransferase 12S subunit; KEGG: tep:TepRe1_1309 1.9e-111 propionyl-CoA carboxylase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.873
KXK64735.1
ATP-grasp domain protein; KEGG: ctc:CTC01706 3.5e-55 carbamoyl-phosphate synthase large chain K01955; Psort location: Cytoplasmic, score: 8.96.
  
 0.858
recX
Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family.
  
    0.850
KXK65102.1
glutaconyl-CoA decarboxylase subunit gamma; KEGG: afn:Acfer_1835 1.3e-32 biotin/lipoyl attachment domain-containing protein; K01615 glutaconyl-CoA decarboxylase.
 
  
 0.848
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.