STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64758.1Isocitrate dehydrogenase, NADP-dependent; KEGG: twi:Thewi_0462 3.3e-162 isocitrate dehydrogenase; K00031 isocitrate dehydrogenase; Psort location: Cytoplasmic, score: 8.96; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (406 aa)    
Predicted Functional Partners:
KXK64540.1
KEGG: cow:Calow_0379 3.0e-246 aconitate hydratase; K01681 aconitate hydratase 1; Psort location: Cytoplasmic, score: 9.97.
  
 0.982
KXK66129.1
3-methyl-2-oxobutanoate dehydrogenase; KEGG: tjr:TherJR_1678 4.8e-122 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.932
KXK66130.1
KEGG: ttm:Tthe_0489 2.3e-99 thiamine pyrophosphate TPP-binding domain-containing protein; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
     
 0.912
KXK64802.1
KEGG: cth:Cthe_0374 1.2e-173 glutamate dehydrogenase K00262; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.911
KXK65088.1
KEGG: awo:Awo_c19610 5.0e-182 (Si)-citrate-synthase K01647; Psort location: Cytoplasmic, score: 9.26.
  
 
 0.910
KXK66131.1
KEGG: tpd:Teth39_0467 7.5e-53 pyruvate/ketoisovalerate oxidoreductase subunit gamma; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Psort location: Cytoplasmic, score: 8.96.
     
 0.909
KXK66128.1
4Fe-4S binding domain protein; KEGG: clb:Clo1100_1588 4.8e-19 hypothetical protein; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
     
 0.901
folD
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
    
 0.898
fhs
Formate--tetrahydrofolate ligase; KEGG: scp:HMPREF0833_11151 2.9e-177 fhs2; formate-tetrahydrofolate ligase K01938; Psort location: Cytoplasmic, score: 8.96; Belongs to the formate--tetrahydrofolate ligase family.
 
 
  
 0.893
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.859
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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