Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KXK64787.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (417 aa)    
Predicted Functional Partners:
KXK64788.1
Hypothetical protein.
       0.496
KXK65256.1
Linocin_M18 bacteriocin protein; KEGG: cnc:CNE_2c09170 1.1e-09 lin; linocin-M18; Psort location: Cytoplasmic, score: 8.96.
 
     0.492
KXK64789.1
KEGG: awo:Awo_c32690 2.7e-96 diguanylate cyclase precursor; Psort location: CytoplasmicMembrane, score: 9.82.
       0.446
KXK64790.1
ABC transporter, solute-binding protein; KEGG: awo:Awo_c32680 8.0e-104 prx; peroxiredoxin precursor K05813.
       0.430
KXK65617.1
Rubredoxin; KEGG: eci:UTI89_C3072 7.3e-48 norV; anaerobic nitric oxide reductase flavorubredoxin K12264; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.404
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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