STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64901.1LysR substrate binding domain protein; KEGG: pfe:PSF113_2320 3.2e-29 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family. (293 aa)    
Predicted Functional Partners:
KXK64903.1
Putative membrane protein; KEGG: pfe:PSF113_1815 6.2e-07 integral membrane protein K11939; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.807
KXK64900.1
Hypothetical protein.
       0.773
KXK66200.1
LysR substrate binding domain protein; KEGG: afw:Anae109_3019 1.1e-12 ABC transporter-like protein; K02041 phosphonate transport system ATP-binding protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the LysR transcriptional regulatory family.
  
     0.578
KXK64902.1
Hypothetical protein.
       0.539
KXK64557.1
KEGG: efe:EFER_3657 0.0090 GntR-family transcriptional regulator K03710; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.465
KXK66280.1
Nitrogen regulatory protein P-II; KEGG: psl:Psta_0819 2.7e-89 multi-sensor hybrid histidine kinase K03320; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the P(II) protein family.
  
  
 0.418
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.