STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64970.1KEGG: rho:RHOM_09995 1.7e-39 protein serine/threonine phosphatase; K01090 protein phosphatase; Psort location: Cytoplasmic, score: 8.96. (244 aa)    
Predicted Functional Partners:
KXK64971.1
Kinase domain protein; KEGG: mas:Mahau_0989 2.9e-99 serine/threonine protein kinase with PASTA sensor(s); K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.995
KXK64968.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.946
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.921
KXK65439.1
Hypothetical protein; KEGG: mej:Q7A_840 5.4e-34 serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.877
KXK66059.1
Hypothetical protein; KEGG: azo:azo3888 4.5e-49 putative serine/threonine kinase K00924; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.872
rlmN
23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
  
  
 0.837
KXK66619.1
Transketolase, pyridine binding domain protein; KEGG: ova:OBV_27000 0. putative pyruvate dehydrogenase E1 component alpha subunit/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
  
 0.832
KXK64053.1
Transketolase, pyridine binding domain protein; KEGG: ate:Athe_0704 1.7e-282 transketolase; K11381 2-oxoisovalerate dehydrogenase E1 component; Psort location: Cytoplasmic, score: 9.97.
  
 0.832
priA
Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
  
    0.827
def-2
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
  
    0.800
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.