STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcALHypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34. (355 aa)    
Predicted Functional Partners:
KXK65324.1
KEGG: amt:Amet_0090 3.1e-47 methyltransferase small; K15460 tRNA1Val (adenine37-N6)-methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the methyltransferase superfamily.
 
     0.749
polC
DNA polymerase III, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
    0.717
KXK64328.1
DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.
  
     0.697
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
     0.655
KXK65141.1
Phosphate acetyltransferase; KEGG: tex:Teth514_1732 5.7e-110 eutD; phosphotransacetylase; K00625 phosphate acetyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.637
KXK64460.1
Hydrolase, HD family; KEGG: sgg:SGGBAA2069_c18170 4.5e-30 HD domain-containing protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.618
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.610
KXK64894.1
Methyltransferase domain protein; KEGG: bce:BC4326 5.9e-37 methyltransferase K00599; Psort location: Cytoplasmic, score: 8.96.
  
    0.564
KXK64389.1
Methyltransferase domain protein; KEGG: cbe:Cbei_5003 2.9e-06 cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase; Psort location: Cytoplasmic, score: 9.97.
  
    0.526
YlqF
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
 
   
 0.490
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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