STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65193.1Oxidoreductase, NAD-binding domain protein; KEGG: gka:GK1898 7.1e-96 myo-inositol 2-dehydrogenase. (389 aa)    
Predicted Functional Partners:
KXK65194.1
AP endonuclease, family 2; KEGG: bxh:BAXH7_00299 1.7e-08 hypothetical protein; K15652 3-dehydroshikimate dehydratase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.901
KXK66091.1
KEGG: apn:Asphe3_10720 2.9e-60 sugar phosphate isomerase/epimerase; K03335 inosose dehydratase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.870
KXK67118.1
AP endonuclease, family 2; KEGG: cls:CXIVA_15980 1.3e-80 IolE; sugar phosphate isomerase/epimerase; K03335 inosose dehydratase.
 
  
 0.855
KXK65198.1
KEGG: gfo:GFO_1023 9.0e-25 apurinic/apyrimidinic endonuclease; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.768
KXK65195.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.634
KXK67056.1
KEGG: gfo:GFO_1023 6.6e-45 apurinic/apyrimidinic endonuclease; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.531
KXK65858.1
Hypothetical protein; KEGG: bmq:BMQ_1771 1.6e-73 two-component sensor histidine kinase/response regulator.
 
    0.468
KXK64221.1
KEGG: sgp:SpiGrapes_3031 3.3e-121 sugar phosphate isomerase/epimerase; K01805 xylose isomerase; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.456
KXK66238.1
Kinase, PfkB family; KEGG: eha:Ethha_2002 9.9e-90 PfkB domain-containing protein; K00847 fructokinase; Psort location: Cytoplasmic, score: 9.97.
  
 0.445
KXK65067.1
AP endonuclease, family 2; KEGG: gym:GYMC10_4659 1.0e-64 xylose isomerase domain-containing protein; K03082 hexulose-6-phosphate isomerase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.442
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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