STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK65199.1Transcriptional regulator, DeoR family; KEGG: lcb:LCABL_29260 1.4e-26 nadD; Nicotinic acid mononucleotide adenyltransferase; Psort location: Cytoplasmic, score: 9.97. (267 aa)    
Predicted Functional Partners:
KXK65198.1
KEGG: gfo:GFO_1023 9.0e-25 apurinic/apyrimidinic endonuclease; Psort location: Cytoplasmic, score: 8.96.
  
    0.664
KXK65197.1
GroES-like protein; KEGG: smq:SinmeB_6288 6.1e-58 L-threonine 3-dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
       0.595
KXK65196.1
Glyoxalase family protein; KEGG: cce:Ccel_1035 1.9e-15 glyoxalase/bleomycin resistance protein/dioxygenase; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 8.96.
       0.594
KXK65191.1
Hexose kinase, 1-phosphofructokinase family; KEGG: cpo:COPRO5265_0216 2.5e-36 pfkB; 1-phosphofructokinase K00882; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.488
PfkB
1-phosphofructokinase; KEGG: elm:ELI_1088 2.6e-82 hypothetical protein; K00882 1-phosphofructokinase; Psort location: Cytoplasmic, score: 9.97; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.469
KXK65732.1
Putative fructose-6-phosphate aldolase; KEGG: pmr:PMI2529 5.4e-34 rpiB; ribose 5-phosphate isomerase K01808; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.413
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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