STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64412.1KEGG: efc:EFAU004_00298 3.1e-16 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96. (359 aa)    
Predicted Functional Partners:
KXK64413.1
Bacterial mobilization protein MobC; Psort location: Cytoplasmic, score: 8.96.
  
    0.795
KXK64411.1
Hypothetical protein.
       0.773
KXK66684.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.86.
 
     0.739
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
  
     0.706
KXK66804.1
Repeat protein; KEGG: cfu:CFU_1278 2.0e-23 yapH; outer membrane autotransporter barrel.
  
     0.702
KXK65273.1
Hypothetical protein; KEGG: ase:ACPL_5928 1.1e-125 F-box DNA helicase protein 1; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.692
KXK66620.1
Repeat protein; KEGG: cfu:CFU_1278 3.0e-17 yapH; outer membrane autotransporter barrel.
  
     0.685
KXK65239.1
Hypothetical protein; KEGG: cfl:Cfla_0905 2.1e-08 glycoside hydrolase family protein; K01181 endo-1,4-beta-xylanase.
 
     0.664
KXK66420.1
Transcriptional activator RinB; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.652
KXK66953.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.626
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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