STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64426.1Hypothetical protein; KEGG: eel:EUBELI_01147 7.6e-44 cytidylate kinase; K00945 cytidylate kinase; Psort location: Cytoplasmic, score: 8.96. (206 aa)    
Predicted Functional Partners:
KXK64425.1
KEGG: rlt:Rleg2_4805 1.1e-26 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.952
KXK65456.1
KEGG: rlt:Rleg2_4805 6.9e-39 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.903
KXK66178.1
KEGG: rlt:Rleg2_4805 1.6e-29 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
     0.899
KXK64774.1
KEGG: rlt:Rleg2_4805 2.6e-32 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.896
KXK66139.1
Putative membrane protein; KEGG: apb:SAR116_2069 3.7e-06 ABC transporter permease; Psort location: CytoplasmicMembrane, score: 10.00.
 
      0.876
KXK66320.1
KEGG: rlt:Rleg2_4805 4.7e-37 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.851
KXK65553.1
KEGG: rlt:Rleg2_4805 2.5e-18 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.761
KXK65497.1
KEGG: rlt:Rleg2_4805 6.9e-39 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
      0.734
rplV
Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
    0.681
KXK66576.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.680
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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