STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64470.1Hypothetical protein. (41 aa)    
Predicted Functional Partners:
KXK64468.1
Putative iron-only hydrogenase system regulator.
       0.709
KXK64469.1
Peptidase, S41 family; KEGG: mas:Mahau_1750 4.5e-62 carboxyl-terminal protease; K03797 carboxyl-terminal processing protease; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the peptidase S41A family.
       0.709
KXK64471.1
KEGG: ccl:Clocl_3269 1.3e-46 uracil-DNA glycosylase, family 4; K02334 DNA polymerase bacteriophage-type.
       0.613
KXK64472.1
Putative uracil-DNA glycosylase A; KEGG: mas:Mahau_0257 1.0e-46 phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 8.96.
       0.613
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.445
KXK64474.1
DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.445
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.