STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64489.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
KXK64485.1
Prepilin-type cleavage/methylation protein.
       0.555
KXK64486.1
Hypothetical protein.
       0.555
KXK64487.1
Hypothetical protein.
       0.555
KXK64488.1
Prepilin-type cleavage/methylation protein; KEGG: rba:RB7745 5.0e-07 prtB; serine protease homologue-secreted serine protease K01417; Psort location: OuterMembrane, score: 9.49.
       0.555
KXK64490.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 2.1e-48 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
       0.522
KXK64491.1
Hypothetical protein.
       0.417
KXK64492.1
Fimbrial assembly protein PilN.
       0.417
KXK64493.1
Hypothetical protein.
       0.417
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.