STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64550.1Hypothetical protein; KEGG: ppd:Ppro_0118 0.0038 glutathione peroxidase; K00432 glutathione peroxidase. (71 aa)    
Predicted Functional Partners:
KXK64551.1
Hypothetical protein; KEGG: efc:EFAU004_01021 2.3e-65 x-Pro dipeptidyl-peptidase K06889; Psort location: Cytoplasmic, score: 8.96.
 
     0.790
KXK64552.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.507
KXK64549.1
Aminotransferase, class I/II; KEGG: atm:ANT_14860 9.1e-80 aminotransferase; Psort location: Cytoplasmic, score: 9.97.
       0.489
KXK64553.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.486
KXK64547.1
YigZ family protein; KEGG: ssr:SALIVB_0364 8.6e-36 Xaa-Pro dipeptidase; Psort location: Cytoplasmic, score: 9.97.
       0.426
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.426
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.