STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (349 aa)    
Predicted Functional Partners:
KXK65154.1
Putative adenosylcobalamin biosynthesis protein CobU; KEGG: mas:Mahau_1099 9.0e-41 adenosylcobinamide-phosphate guanylyltransferase K02231; Psort location: Cytoplasmic, score: 9.97.
  
 0.991
cobS
Cobalamin-5-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.966
KXK65153.1
Phosphoglycerate mutase family protein; KEGG: cbi:CLJ_B0861 7.3e-23 cobC; alpha-ribazole phosphatase K02226; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.952
KXK64944.1
KEGG: med:MELS_0982 4.1e-45 cob(I)yrinic acid a; K00798 cob(I)alamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
   
 0.816
KXK64633.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.784
hisC
KEGG: eha:Ethha_2692 3.0e-81 histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase; Psort location: Cytoplasmic, score: 9.26; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.622
KXK66759.1
Putative L-threonine 3-dehydrogenase; KEGG: thl:TEH_11640 1.2e-86 putative zinc-containing alcohol dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
      0.552
KXK64634.1
Hypothetical protein.
       0.535
KXK64631.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.439
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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