STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64642.1KEGG: pfe:PSF113_4138 5.4e-06 TetR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (207 aa)    
Predicted Functional Partners:
KXK64643.1
KEGG: rlt:Rleg2_4805 1.0e-40 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.750
GltA
Glutamate synthase; KEGG: ttm:Tthe_1158 5.1e-173 glutamate synthase (NADPH), homotetrameric; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
     
 0.513
KXK64644.1
KEGG: ctx:Clo1313_1848 7.3e-94 oxidoreductase FAD/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
       0.495
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.