STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64650.1TrkA protein; Psort location: CytoplasmicMembrane, score: 10.00. (246 aa)    
Predicted Functional Partners:
KXK64649.1
YhhN-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.737
KXK65364.1
Repeat protein; KEGG: isc:IscW_ISCW000348 6.6e-31 secreted mucin MUC17, putative; Psort location: OuterMembrane, score: 8.59.
  
     0.734
KXK66620.1
Repeat protein; KEGG: cfu:CFU_1278 3.0e-17 yapH; outer membrane autotransporter barrel.
  
     0.714
KXK66804.1
Repeat protein; KEGG: cfu:CFU_1278 2.0e-23 yapH; outer membrane autotransporter barrel.
  
     0.699
KXK66884.1
LPXTG-motif protein cell wall anchor domain protein; KEGG: mma:MM_0211 5.3e-41 cysteine proteinase; K01376.
  
     0.695
KXK65239.1
Hypothetical protein; KEGG: cfl:Cfla_0905 2.1e-08 glycoside hydrolase family protein; K01181 endo-1,4-beta-xylanase.
  
     0.687
KXK66953.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.669
KXK65490.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.645
KXK65813.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.637
KXK66186.1
Hypothetical protein; KEGG: aur:HMPREF9243_0729 0.0057 ptsG; PTS system glucose-specific transporter subunit IICBA; K02777 PTS system, glucose-specific IIA component; K02778 PTS system, glucose-specific IIB component K02779; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.636
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.