STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64266.1KEGG: cpf:CPF_2328 1.7e-60 glycosyl transferase family protein K00754; Psort location: CytoplasmicMembrane, score: 10.00. (412 aa)    
Predicted Functional Partners:
KXK64896.1
Tetratricopeptide repeat protein; KEGG: ppo:PPM_0159 5.4e-43 ogt1; UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase 110 kDa subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.693
CysK-2
Cysteine synthase A; KEGG: shi:Shel_22690 4.8e-113 cysteine synthase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.568
KXK64265.1
Iron only hydrogenase large subunit domain protein; KEGG: dca:Desca_0935 4.0e-109 ferredoxin hydrogenase.
       0.531
KXK65831.1
Diguanylate cyclase domain protein; KEGG: pfe:PSF113_0499 4.9e-51 sensory box-containing diguanylate cyclase; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.499
KXK66800.1
Polysaccharide deacetylase; KEGG: scp:HMPREF0833_10283 1.3e-34 pgdA; peptidoglycan N-acetylglucosamine deacetylase A.
  
  
 0.451
KXK66801.1
Polysaccharide deacetylase; KEGG: llm:llmg_0293 1.1e-33 xynD; endo-1,4-beta-xylanase D K01463.
  
  
 0.451
KXK66802.1
Polysaccharide deacetylase; KEGG: scp:HMPREF0833_10283 1.2e-38 pgdA; peptidoglycan N-acetylglucosamine deacetylase A.
  
  
 0.451
KXK66265.1
KEGG: cpf:CPF_2122 1.1e-42 pdaA; delta-lactam-biosynthetic de-N-acetylase K01506; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.451
KXK65330.1
Diguanylate cyclase domain protein; KEGG: npu:Npun_F5361 2.2e-53 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 0.429
KXK64268.1
Hypothetical protein; KEGG: ova:OBV_15660 3.1e-22 dinB; DNA polymerase IV K02346.
  
  
 0.420
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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