STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64332.1Putative ribonuclease G; KEGG: toc:Toce_0752 6.5e-125 RNAse G; K08301 ribonuclease G; Psort location: Cytoplasmic, score: 9.97. (509 aa)    
Predicted Functional Partners:
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
 
 0.891
KXK64665.1
Hypothetical protein; Displays ATPase and GTPase activities.
 
 
 
 0.783
KXK64333.1
Radical SAM-linked protein; KEGG: sat:SYN_01355 2.9e-13 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 8.96.
       0.773
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
 0.762
KXK66821.1
DEAD-box ATP-dependent RNA helicase CshA family protein; KEGG: cdl:CDR20291_0689 2.5e-93 ATP-dependent RNA helicase; K05592 ATP-dependent RNA helicase DeaD; Psort location: Cytoplasmic, score: 9.97; Belongs to the DEAD box helicase family.
  
 
 0.752
KXK64968.1
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
  
 0.737
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
 
    0.715
rplU
Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
  
    0.629
KXK64334.1
Radical SAM domain protein; KEGG: ctc:CTC02064 2.7e-158 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 8.96.
       0.619
KXK65476.1
Putative protein jag; KEGG: sgg:SGGBAA2069_c20720 1.9e-11 jag; Jag family RNA-binding protein K06346; Psort location: Cytoplasmic, score: 8.96.
   
   0.598
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.