STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64023.1Hypothetical protein; KEGG: amo:Anamo_1262 5.5e-18 methylmalonyl-CoA epimerase; Psort location: Cytoplasmic, score: 8.96. (175 aa)    
Predicted Functional Partners:
KXK64024.1
KEGG: efa:EF3304 8.6e-36 mipB; fructose-6-phosphate aldolase; K01636; Psort location: Cytoplasmic, score: 9.97.
     
 0.781
KXK64025.1
AP endonuclease, family 2; KEGG: rba:RB11728 2.6e-27 tagatose 3-epimerase; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.620
KXK65104.1
Putative methylmalonyl-CoA carboxyltransferase 12S subunit; KEGG: tep:TepRe1_1309 1.9e-111 propionyl-CoA carboxylase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.612
KXK64022.1
KEGG: cle:Clole_1997 1.3e-126 betaine-aldehyde dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.538
KXK64019.1
Electron transfer flavoprotein FAD-binding domain protein; KEGG: cpe:CPE0095 6.7e-68 crotonase; K01715 3-hydroxybutyryl-CoA dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.481
KXK64021.1
KEGG: cpf:CPF_2584 1.7e-117 bcd; butyryl-CoA dehydrogenase K00248; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.463
KXK64026.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
    0.451
KXK64027.1
Putative ribose transport system permease protein RbsC; KEGG: apr:Apre_1619 8.2e-63 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.428
KXK64028.1
Putative ribose transport ATP-binding protein rbsa; KEGG: clj:CLJU_c01270 7.6e-115 sugar ABC transporter ATPase; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.428
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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