STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXK64107.1Cof-like hydrolase; KEGG: ppo:PPM_2402 1.2e-45 cof; HMP-PP phosphatase K07024; Psort location: Cytoplasmic, score: 8.96. (276 aa)    
Predicted Functional Partners:
KXK64105.1
KEGG: bpd:BURPS668_3093 6.6e-29 glycosyl transferase, group 2 family protein K07011; Psort location: Cytoplasmic, score: 8.96.
     
 0.601
KXK64108.1
Oxidoreductase, NAD-binding domain protein; KEGG: eum:ECUMN_2961 3.0e-40 putative dehydrogenase from bacteriophage origin.
  
    0.583
KXK64106.1
Hypothetical protein.
       0.581
RfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.563
rbsK-4
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.561
KXK64110.1
KEGG: acl:ACL_0286 1.7e-62 pigL; N-acetylglucosaminylphosphatidylinositol deacetylase; Psort location: Cytoplasmic, score: 8.96.
  
    0.542
KXK64109.1
KEGG: tte:TTE1023 1.7e-55 nagB; glucosamine-6-phosphate deaminase K02564; Psort location: Cytoplasmic, score: 8.96.
     
 0.540
RfbC
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
       0.537
KXK64112.1
Putative L-arabinose ABC transporter, permease protein AraH; KEGG: bac:BamMC406_4659 2.1e-55 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
       0.500
rbsA-5
Putative sugar ABC transporter, ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
       0.500
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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