STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rbsA-5Putative sugar ABC transporter, ATP binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (516 aa)    
Predicted Functional Partners:
KXK64118.1
ABC transporter, ATP-binding protein; KEGG: esc:Entcl_3382 6.5e-70 ABC transporter; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
 
0.921
rbsK-4
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
  
 0.826
KXK64112.1
Putative L-arabinose ABC transporter, permease protein AraH; KEGG: bac:BamMC406_4659 2.1e-55 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
   0.825
KXK64109.1
KEGG: tte:TTE1023 1.7e-55 nagB; glucosamine-6-phosphate deaminase K02564; Psort location: Cytoplasmic, score: 8.96.
       0.762
KXK64110.1
KEGG: acl:ACL_0286 1.7e-62 pigL; N-acetylglucosaminylphosphatidylinositol deacetylase; Psort location: Cytoplasmic, score: 8.96.
       0.762
KXK64108.1
Oxidoreductase, NAD-binding domain protein; KEGG: eum:ECUMN_2961 3.0e-40 putative dehydrogenase from bacteriophage origin.
  
    0.696
KXK64114.1
Hypothetical protein; KEGG: cag:Cagg_2906 1.3e-18 monosaccharide-transporting ATPase K10439; Psort location: Periplasmic, score: 9.76.
  
 
 0.665
KXK64107.1
Cof-like hydrolase; KEGG: ppo:PPM_2402 1.2e-45 cof; HMP-PP phosphatase K07024; Psort location: Cytoplasmic, score: 8.96.
       0.500
RbsC-5
Putative ribose ABC transporter permease protein; KEGG: trq:TRQ2_0974 8.7e-75 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.479
RbsC-6
Putative ribose ABC transporter permease protein; KEGG: apr:Apre_1619 2.0e-68 monosaccharide-transporting ATPase K10440; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.476
Your Current Organism:
Christensenella minuta
NCBI taxonomy Id: 626937
Other names: C. minuta, Catabacter sp. YIT 12065, Christensenella minuta Morotomi et al. 2012, DSM 22607, JCM 16072, YIT 12065
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