STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLA38104.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)    
Predicted Functional Partners:
OLA38102.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
OLA38103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
OLA37415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.750
OLA37413.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.747
OLA38206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.744
mntP
Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
       0.675
OLA37453.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
OLA39396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.605
OLA37295.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.592
OLA38107.1
Polysaccharide synthesis protein GtrA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.591
Your Current Organism:
Phascolarctobacterium succinatutens
NCBI taxonomy Id: 626940
Other names: DSM 22533, JCM 16074, P. succinatutens, Phascolarctobacterium sp. YIT 12068, Phascolarctobacterium succinatutens Watanabe et al. 2012, YIT 12067
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