STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_217035PKS-NRPS hybrid synthetase. (735 aa)    
Predicted Functional Partners:
GcM3_177006
26S proteasome regulatory subunit rpn11.
    
 0.673
GcM3_042006
Transcription factor tau subunit sfc4.
    
 0.635
GcM3_059020
Putative RNA polymerase III transcription factor subunit.
    
 0.631
GcM3_124006
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
    
 0.626
GcM3_202006
Uncharacterized protein.
    
 0.599
GcM3_135010
Purine nucleoside permease.
    
 0.599
GcM3_125023
Acidic mammalian chitinase.
    
 0.599
GcM3_080002
Endochitinase B1; Belongs to the glycosyl hydrolase 18 family.
    
 0.599
GcM3_080018
Acidic mammalian chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 0.599
GcC1_125009
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.599
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.