STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_203024Splicing factor ESS-2-like protein. (446 aa)    
Predicted Functional Partners:
GcM3_214006
Pre-mRNA-processing factor 19.
    
 
 0.628
GcM3_086020
U2 small nuclear ribonucleoprotein A.
    
   0.607
GcM3_193013
Pre-mRNA-splicing factor SYF1.
   
 
 0.597
GcM3_207021
Pre-mRNA-splicing factor cwf10.
    
   0.525
GcM1_240084
Guanine nucleotide-binding protein subunit beta-like protein.
    
   0.499
GcM3_099002
Coiled-coil domain-containing protein 130.
    
 
 0.463
GcM3_013006
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
    
 
 0.425
GcM3_091016
G-patch domain-containing protein.
   
 
 0.419
GcM3_094024
Uncharacterized protein C20H4.06c.
    
 
 0.409
GcM3_166022
Pre-mRNA-splicing factor syf2.
    
   0.403
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.