STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_200003Putative xanthine/uracil permease. (584 aa)    
Predicted Functional Partners:
GcM3_119002
Cutinase transcription factor 1 alpha.
    
 0.815
GcM3_053021
Ubiquitin carboxyl-terminal hydrolase.
 
  
  0.804
GcM3_185025
Ankyrin repeat protein nuc-2.
    
 0.797
GcC1_074006
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.796
GcM3_111003
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.796
GcM3_194038
Serine/threonine-protein phosphatase.
    
 0.784
GcM3_018022
Elongin-C; Belongs to the SKP1 family.
    
 0.784
GcM3_011009
GTPase-activating protein.
    
 0.784
GcM3_207026
Uncharacterized protein.
    
 0.782
GcM3_048007
Choline oxidase.
    
 0.782
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.