STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_195006ABC transporter domain-containing protein C20G4.01. (284 aa)    
Predicted Functional Partners:
GcM3_013052
Bifunctional cytokinin biosynthesis protein.
 
      0.699
GcM3_117004
Adenosylhomocysteinase.
    
   0.472
GcM3_175011
VHS domain-containing protein.
   
    0.437
GcM3_092029
Ribosome assembly protein rrb1.
 
      0.431
GcM3_203027
Prion formation protein 1.
      
 0.418
GcM3_081005
CCR4-NOT transcription complex subunit 3.
      
 0.412
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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