STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_184004Putative regulator of chromosome condensation-like protein. (529 aa)    
Predicted Functional Partners:
GcC1_162004
Splicing factor 3B subunit 6-like protein.
    
 
 0.910
GcC1_074025
Splicing factor subunit; Belongs to the SF3B5 family.
    
 
 0.901
GcM3_027016
U2 snRNP component prp10.
    
 
 0.900
GcM3_123006
Pre-mRNA-splicing factor sap61.
    
 
 0.897
GcM3_081015
Pre-mRNA-splicing factor sap114.
   
 
 0.887
GcM3_095008
Putative thermotolerance protein.
    
 
 0.836
GcM3_082002
Pre-mRNA-splicing factor rse1.
    
 
 0.836
GcM3_201019
Spliceosome-associated protein 49.
    
 
 0.825
GcC1_214001
Splicing factor 3A subunit 2.
    
 
 0.823
GcM3_210030
Small glutamine-rich tetratricopeptide repeat-containing protein 2.
    
   0.700
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.