STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_164006Protein transport protein yif1. (325 aa)    
Predicted Functional Partners:
GcM3_158003
Protein transport protein yip1.
   
 
 0.945
GcC1_057018
PRA1 family protein.
   
 
 0.861
GcM3_210017
WW domain-containing protein.
   
 
 0.616
GcM3_018002
GTP-binding protein ypt1.
   
 
 0.616
GcM3_207035
Anucleate primary sterigmata protein B.
    
 
 0.555
GcM3_156003
t-SNARE affecting a late Golgi compartment protein 1.
   
 
 0.511
GcM1_250051
Protein YOP1.
    
 
 0.499
GcM3_129011
Protein YIP.
   
  
 0.492
GcM3_026027
Vacuolar protein sorting-associated protein vps5.
    
 
 0.467
GcC1_153010
Protein transport protein sec13; Belongs to the WD repeat SEC13 family.
   
  
 0.452
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.