STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_163002Putative c2h2 transcription factor protein. (685 aa)    
Predicted Functional Partners:
GcM3_039003
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.736
GcM3_026039
Proteasome subunit alpha type.
    
 
 0.731
GcM3_120003
26S proteasome non-ATPase regulatory subunit 4-like protein.
    
 
 0.710
GcM3_185025
Ankyrin repeat protein nuc-2.
   
 
 0.707
GcM3_224018
Putative 26S proteasome complex subunit sem-1.
    
 
 0.653
GcM3_170006
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 
 0.563
GcM3_010015
Glycerophosphocholine phosphodiesterase GDE1.
   
  
 0.562
GcM3_026004
Set1 complex component swd1.
    
 
 0.537
GcM3_028018
E3 ubiquitin protein ligase.
    
   0.530
GcM3_062001
Helicase SWR1.
    
   0.523
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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