STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_151002GPI transamidase component GAA1. (628 aa)    
Predicted Functional Partners:
GcM3_175005
GPI transamidase component GPI17.
   
 0.998
GcM3_163015
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.998
GcM3_007002
GPI transamidase component GPI16.
   
 0.998
GcM3_179014
Phosphatidylinositol glycan anchor biosynthesis class U protein.
   
 0.992
GcM3_151003
Rhomboid protein 2.
 
 
    0.901
GcM3_008023
GPI ethanolamine phosphate transferase 3.
    
 0.894
GcM3_185011
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 0.884
GcM3_036017
Glycosylphosphatidylinositol anchor biosynthesis protein 11.
     
 0.818
GcM3_031019
3-ketodihydrosphingosine reductase tsc10.
     
 0.818
GcM3_060006
GPI ethanolamine phosphate transferase 1.
   
 0.629
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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