STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_136003Rho guanine nucleotide exchange factor scd1. (1011 aa)    
Predicted Functional Partners:
GcM3_221023
Protein scd2/ral3.
    
 0.997
GcM3_065006
Cell division control protein 42-like protein.
    
 0.987
GcM3_043010
Guanine nucleotide-binding protein subunit beta.
    
 0.985
GcM3_022015
Putative vwa-like protein.
    
 0.983
GcC1_053015
Ras-related C3 botulinum toxin substrate 1.
    
 0.973
GcM3_011009
GTPase-activating protein.
    
 
 0.951
GcM3_159015
Ras-related protein Rap-1b.
    
 0.934
GcM3_110010
Ras-like protein.
    
 0.934
GcM3_037021
Protein ras-2.
    
 0.934
GcC1_171005
GTP-binding protein rhoA.
    
 0.913
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.