STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM1_244098Peptidyl-prolyl cis-trans isomerase E. (153 aa)    
Predicted Functional Partners:
GcM3_214006
Pre-mRNA-processing factor 19.
    
 0.999
GcM3_193013
Pre-mRNA-splicing factor SYF1.
   
 0.999
GcC1_207026
Protein BUD31-like protein.
   
 0.998
GcM3_191010
Pre-mRNA-splicing factor; Involved in mRNA splicing where it associates with cdc5 and the other cwf proteins as part of the spliceosome.
    
 0.998
GcM3_185040
Pre-mRNA-splicing factor slt11.
   
 0.998
GcC1_144027
Pre-mRNA-splicing factor ISY1.
   
 0.998
GcM3_126012
Pre-mRNA-processing protein 45.
   
 0.998
GcM3_012033
Pre-mRNA-splicing factor clf1.
   
 0.998
GcM3_005019
Putative coiled-coil domain-containing protein 16.
    
 0.997
GcM3_166022
Pre-mRNA-splicing factor syf2.
    
 0.959
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.