STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_103020Putative krueppel c2h2-type zinc finger protein. (445 aa)    
Predicted Functional Partners:
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.792
GcM3_150008
37S ribosomal protein S18, mitochondrial.
    
 0.790
GcM3_206001
25S rRNA-methyltransferase.
   
 0.788
GcM3_198010
Chromatin remodeling factor mit1.
   
 0.787
GcM3_098010
Nucleoside diphosphate kinase.
    
 0.786
GcM3_042006
Transcription factor tau subunit sfc4.
    
 0.785
GcM3_105015
Ribosomal protein S16, mitochondrial.
   
 0.784
GcM3_197010
37S ribosomal protein S9, mitochondrial.
    
  0.782
GcC1_199047
37S ribosomal protein MRP17, mitochondrial.
    
  0.782
GcM3_026022
Putative ribosomal protein s15; Belongs to the universal ribosomal protein uS15 family.
   
 0.781
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
Server load: low (26%) [HD]