STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_101001Uncharacterized protein. (573 aa)    
Predicted Functional Partners:
GcM3_219022
60S ribosomal protein L7.
  
 0.996
GcC1_057004
60S ribosomal protein L25.
  
 0.996
GcM3_133021
60S ribosomal protein L5.
  
 0.996
GcM3_094005
Adenosine kinase.
  
 0.996
GcC1_170008
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.996
GcM3_006006
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.996
GcM3_001012
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.996
GcM3_223009
40S ribosomal protein S17.
   
 0.995
GcC1_225054
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.995
GcM3_221001
60S ribosomal protein L33-B.
   
 0.995
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.