STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_093018Ubiquitin-NEDD8-like protein RUB1. (66 aa)    
Predicted Functional Partners:
GcM3_190030
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
GcM3_041030
NEDD8-specific protease 2.
    
 0.999
GcM3_040008
NEDD8-activating enzyme E1 catalytic subunit.
    
 0.999
GcM3_027006
E3 ubiquitin-protein ligase RBX1.
   
 0.991
GcM3_203027
Prion formation protein 1.
    
 
 0.989
GcM3_135001
Elongation factor 3.
    
 
 0.989
GcM3_056011
COP9 signalosome complex subunit 5.
   
 0.985
GcM3_004018
COP9 signalosome complex subunit 6.
   
 0.985
GcM3_082027
Putative riboflavin aldehydeforming.
    
 0.983
GcM3_190047
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
    
 0.982
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.