STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_072002Protein YOP1. (353 aa)    
Predicted Functional Partners:
GcM3_204035
Reticulon-like protein.
   
 
 0.615
GcM1_250051
Protein YOP1.
  
 
 
0.524
GcM3_086002
Putative aaa family atpase.
   
 
 0.453
GcM3_002008
Cytochrome b5 domain-containing protein RLF; Belongs to the cytochrome b5 family.
     
 0.449
GcM3_147006
Zinc_ribbon_10 domain-containing protein.
    
 
 0.426
GcM3_114013
Senescence domain-containing protein.
    
 
 0.415
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.