STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_072007Intracellular protein transport protein USO1. (887 aa)    
Predicted Functional Partners:
GcM3_176005
Integral membrane protein sed5.
    
 0.983
GcM3_113015
Protein transport protein BET1.
   
 0.980
GcM3_083006
Protein sly1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.980
GcM3_079003
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
    
 0.980
GcM3_210017
WW domain-containing protein.
   
 0.976
GcM3_018002
GTP-binding protein ypt1.
   
 0.976
GcM3_158009
Mitochondrial inner membrane protein.
    
 0.973
GcM3_185045
Protein transport protein sec22; Belongs to the synaptobrevin family.
   
 0.965
GcM3_032005
Uncharacterized protein C1D4.02c.
   
 0.964
GcM3_046008
Synaptobrevin-like protein ykt6; Belongs to the synaptobrevin family.
   
 0.960
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
Server load: low (26%) [HD]