Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ERB1 | GcM3_008025 | A0A420IWN9 | A0A420JAD9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nuclear GTP-binding protein NUG1. | 0.998 |
| ERB1 | GcM3_024033 | A0A420IWN9 | A0A420J6W2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein BRX1. | 0.995 |
| ERB1 | GcM3_076010 | A0A420IWN9 | A0A420IQJ6 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA helicase. | 0.998 |
| ERB1 | GcM3_125022 | A0A420IWN9 | A0A420I698 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Putative NOC2 family protein. | 0.994 |
| ERB1 | GcM3_167006 | A0A420IWN9 | A0A420HRY3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.996 |
| ERB1 | GcM3_183034 | A0A420IWN9 | A0A420HLL9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.995 |
| ERB1 | GcM3_219022 | A0A420IWN9 | A0A420H7I9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 60S ribosomal protein L7. | 0.996 |
| ERB1 | NOP7 | A0A420IWN9 | A0A420HN58 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
| ERB1 | SPB1 | A0A420IWN9 | A0A420HRQ4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.994 |
| ERB1 | YTM1 | A0A420IWN9 | A0A420IPQ9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
| GcM3_008025 | ERB1 | A0A420JAD9 | A0A420IWN9 | Nuclear GTP-binding protein NUG1. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.998 |
| GcM3_008025 | GcM3_024033 | A0A420JAD9 | A0A420J6W2 | Nuclear GTP-binding protein NUG1. | Ribosome biogenesis protein BRX1. | 0.989 |
| GcM3_008025 | GcM3_076010 | A0A420JAD9 | A0A420IQJ6 | Nuclear GTP-binding protein NUG1. | RNA helicase. | 0.996 |
| GcM3_008025 | GcM3_125022 | A0A420JAD9 | A0A420I698 | Nuclear GTP-binding protein NUG1. | Putative NOC2 family protein. | 0.995 |
| GcM3_008025 | GcM3_167006 | A0A420JAD9 | A0A420HRY3 | Nuclear GTP-binding protein NUG1. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.995 |
| GcM3_008025 | GcM3_183034 | A0A420JAD9 | A0A420HLL9 | Nuclear GTP-binding protein NUG1. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.997 |
| GcM3_008025 | GcM3_219022 | A0A420JAD9 | A0A420H7I9 | Nuclear GTP-binding protein NUG1. | 60S ribosomal protein L7. | 0.983 |
| GcM3_008025 | NOP7 | A0A420JAD9 | A0A420HN58 | Nuclear GTP-binding protein NUG1. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
| GcM3_008025 | SPB1 | A0A420JAD9 | A0A420HRQ4 | Nuclear GTP-binding protein NUG1. | AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.987 |
| GcM3_008025 | YTM1 | A0A420JAD9 | A0A420IPQ9 | Nuclear GTP-binding protein NUG1. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.995 |
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