STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_05900860S ribosomal protein L21-A. (160 aa)    
Predicted Functional Partners:
GcM3_223009
40S ribosomal protein S17.
   
 
 0.999
GcM3_221001
60S ribosomal protein L33-B.
   
 0.999
GcM3_219022
60S ribosomal protein L7.
   
 0.999
GcC1_057004
60S ribosomal protein L25.
   
 0.999
GcC1_203023
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
GcC1_203037
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.999
GcM3_201023
Putative 60S ribosomal protein L28e.
   
 0.999
GcC1_198020
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
 0.999
GcC1_046001
40S ribosomal protein S19.
  
 
 0.999
GcC1_084005
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.999
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.