STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_052003Uncharacterized protein. (439 aa)    
Predicted Functional Partners:
GcM3_014025
SWI/SNF chromatin-remodeling complex subunit snf5.
  
 
 0.948
GcM3_222022
Actin-related protein 4.
    
 0.896
GcM3_197003
SWI/SNF and RSC complexes subunit ssr3.
    
 0.895
GcM3_131003
SWI/SNF and RSC complexes subunit ssr2.
    
 0.895
GcM3_006017
Chromatin structure-remodeling complex subunit rsc1.
    
 0.894
GcM3_209001
SWI/SNF chromatin-remodeling complex subunit snf5.
    
 0.869
GcM3_205003
SWIB/MDM2 domain protein.
    
 0.864
GcM3_013023
Uncharacterized protein.
    
 0.821
GcM3_009028
Uncharacterized protein.
    
 0.821
GcM3_136005
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.794
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.