STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_037007RNA-binding protein rnc1. (472 aa)    
Predicted Functional Partners:
GcM3_185009
Pre-mRNA-processing-splicing factor 8.
    
   0.823
GcM3_153003
Nuclear cap-binding protein subunit 2.
    
 0.823
GcM3_080023
Transformer-SR ribonucleoprotein/RNA recognition motif containing protein.
   
 0.820
GcM3_201018
Nuclear cap-binding protein subunit 1.
    
 0.811
GcM3_080029
Glycine-rich RNA-binding protein 4, mitochondrial.
   
 0.786
GcM3_203004
Translation initiation factor 4B.
   
 0.776
GcM3_005019
Putative coiled-coil domain-containing protein 16.
    
   0.776
GcM3_167004
U1 small nuclear ribonucleoprotein 70 kDa-like protein.
   
 0.773
GcC1_037027
Pre-mRNA-splicing factor srp2.
   
 0.761
GcM3_032010
Putative pre-mrna-splicing factor.
   
 0.750
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.