STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_037029Protein VTS1. (622 aa)    
Predicted Functional Partners:
GcM3_194003
Putative pumilio domain-containing protein.
    
 
 0.498
GcM3_057004
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 
 0.481
GcM3_009017
Putative topoisomerase family protein.
   
 
 0.473
GcM3_023007
Glucose-repressible alcohol dehydrogenase transcriptional effector.
    
 
 0.462
GcM3_025013
Putative rna-binding protein.
   
 
 0.446
GcM3_042006
Transcription factor tau subunit sfc4.
 
  
   0.431
GcM3_178017
14-3-3 protein-like protein; Belongs to the 14-3-3 family.
    
   0.402
GcM3_010019
14-3-3 protein-like protein; Belongs to the 14-3-3 family.
    
   0.402
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.