STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_027022Putative ring finger domain protein. (499 aa)    
Predicted Functional Partners:
GcM3_137010
OTU domain-containing protein.
    
 0.718
GcM3_178003
Ubiquitin carboxyl-terminal hydrolase 4; Belongs to the peptidase C19 family.
    
 0.696
GcC1_183040
Ubiquitin-40S ribosomal protein S27a.
    
  0.551
GcM3_055019
BZIP domain-containing protein.
    
  0.551
GcM3_207010
Putative ubiquitin-protein ligase.
     
 0.539
GcM3_129010
Ubiquitin-60S ribosomal protein L40.
    
  0.520
GcM3_095004
RNA polymerase I-specific transcription initiation factor rrn7.
    
  0.520
GcM3_075003
Ubiquitin-60S ribosomal protein L40.
    
  0.520
GcM3_091014
Ubiquitin-conjugating enzyme E2-16 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.422
GcC1_040018
Ubiquitin-conjugating enzyme E2 13; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.422
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.