STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_014024Eukaryotic translation initiation factor 5B. (1058 aa)    
Predicted Functional Partners:
GcM3_006006
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.987
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.986
GcC1_225054
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.981
GcM3_133021
60S ribosomal protein L5.
   
 
 0.978
GcM3_197010
37S ribosomal protein S9, mitochondrial.
  
 0.976
GcM3_094005
Adenosine kinase.
   
 0.976
GcM3_017020
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 0.976
GcC1_057004
60S ribosomal protein L25.
   
 
 0.975
GcC1_203037
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.974
GcC1_199047
37S ribosomal protein MRP17, mitochondrial.
   
 0.974
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.