Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GcC1_125009 | GcC1_153010 | A0A420IPH1 | A0A420IF07 | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | 0.710 |
GcC1_125009 | GcM3_014017 | A0A420IPH1 | A0A420J986 | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.599 |
GcC1_125009 | GcM3_177006 | A0A420IPH1 | A0A420HNX1 | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 26S proteasome regulatory subunit rpn11. | 0.726 |
GcC1_153010 | GcC1_125009 | A0A420IF07 | A0A420IPH1 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.710 |
GcC1_153010 | GcM3_014017 | A0A420IF07 | A0A420J986 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Uncharacterized protein. | 0.545 |
GcC1_153010 | GcM3_124006 | A0A420IF07 | A0A420I6A8 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.996 |
GcC1_153010 | GcM3_130009 | A0A420IF07 | A0A420I4U2 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | Endosomal protein P24B. | 0.904 |
GcC1_153010 | GcM3_177006 | A0A420IF07 | A0A420HNX1 | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | 26S proteasome regulatory subunit rpn11. | 0.426 |
GcM3_014017 | GcC1_125009 | A0A420J986 | A0A420IPH1 | Uncharacterized protein. | SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. | 0.599 |
GcM3_014017 | GcC1_153010 | A0A420J986 | A0A420IF07 | Uncharacterized protein. | Protein transport protein sec13; Belongs to the WD repeat SEC13 family. | 0.545 |
GcM3_014017 | GcM3_042006 | A0A420J986 | A0A420J1V2 | Uncharacterized protein. | Transcription factor tau subunit sfc4. | 0.635 |
GcM3_014017 | GcM3_059020 | A0A420J986 | A0A420IWW2 | Uncharacterized protein. | Putative RNA polymerase III transcription factor subunit. | 0.631 |
GcM3_014017 | GcM3_073035 | A0A420J986 | A0A420IRV8 | Uncharacterized protein. | Chromatin modification-related protein eaf3. | 0.567 |
GcM3_014017 | GcM3_124006 | A0A420J986 | A0A420I6A8 | Uncharacterized protein. | Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family. | 0.626 |
GcM3_014017 | GcM3_126012 | A0A420J986 | A0A420I641 | Uncharacterized protein. | Pre-mRNA-processing protein 45. | 0.555 |
GcM3_014017 | GcM3_130009 | A0A420J986 | A0A420I4U2 | Uncharacterized protein. | Endosomal protein P24B. | 0.560 |
GcM3_014017 | GcM3_177006 | A0A420J986 | A0A420HNX1 | Uncharacterized protein. | 26S proteasome regulatory subunit rpn11. | 0.673 |
GcM3_014017 | GcM3_220013 | A0A420J986 | A0A420H712 | Uncharacterized protein. | Centromere protein I. | 0.575 |
GcM3_042006 | GcM3_014017 | A0A420J1V2 | A0A420J986 | Transcription factor tau subunit sfc4. | Uncharacterized protein. | 0.635 |
GcM3_042006 | GcM3_059020 | A0A420J1V2 | A0A420IWW2 | Transcription factor tau subunit sfc4. | Putative RNA polymerase III transcription factor subunit. | 0.999 |
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