Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GcM3_007002 | GcM3_008023 | A0A420JAM4 | A0A420JAG7 | GPI transamidase component GPI16. | GPI ethanolamine phosphate transferase 3. | 0.885 |
GcM3_007002 | GcM3_031019 | A0A420JAM4 | A0A420J4T6 | GPI transamidase component GPI16. | 3-ketodihydrosphingosine reductase tsc10. | 0.905 |
GcM3_007002 | GcM3_036017 | A0A420JAM4 | A0A420J3N3 | GPI transamidase component GPI16. | Glycosylphosphatidylinositol anchor biosynthesis protein 11. | 0.905 |
GcM3_007002 | GcM3_151002 | A0A420JAM4 | A0A420HX06 | GPI transamidase component GPI16. | GPI transamidase component GAA1. | 0.998 |
GcM3_007002 | GcM3_163015 | A0A420JAM4 | A0A420HT29 | GPI transamidase component GPI16. | GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. | 0.998 |
GcM3_007002 | GcM3_174011 | A0A420JAM4 | A0A420HPS2 | GPI transamidase component GPI16. | GPI ethanolamine phosphate transferase 2. | 0.722 |
GcM3_007002 | GcM3_175005 | A0A420JAM4 | A0A420HPG5 | GPI transamidase component GPI16. | GPI transamidase component GPI17. | 0.998 |
GcM3_007002 | GcM3_179014 | A0A420JAM4 | A0A420HN56 | GPI transamidase component GPI16. | Phosphatidylinositol glycan anchor biosynthesis class U protein. | 0.992 |
GcM3_007002 | GcM3_185011 | A0A420JAM4 | A0A420HKB0 | GPI transamidase component GPI16. | GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins. | 0.888 |
GcM3_007002 | GcM3_195008 | A0A420JAM4 | A0A420HGB9 | GPI transamidase component GPI16. | GPI ethanolamine phosphate transferase 2. | 0.722 |
GcM3_008023 | GcM3_007002 | A0A420JAG7 | A0A420JAM4 | GPI ethanolamine phosphate transferase 3. | GPI transamidase component GPI16. | 0.885 |
GcM3_008023 | GcM3_031019 | A0A420JAG7 | A0A420J4T6 | GPI ethanolamine phosphate transferase 3. | 3-ketodihydrosphingosine reductase tsc10. | 0.894 |
GcM3_008023 | GcM3_036017 | A0A420JAG7 | A0A420J3N3 | GPI ethanolamine phosphate transferase 3. | Glycosylphosphatidylinositol anchor biosynthesis protein 11. | 0.894 |
GcM3_008023 | GcM3_151002 | A0A420JAG7 | A0A420HX06 | GPI ethanolamine phosphate transferase 3. | GPI transamidase component GAA1. | 0.894 |
GcM3_008023 | GcM3_163015 | A0A420JAG7 | A0A420HT29 | GPI ethanolamine phosphate transferase 3. | GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family. | 0.918 |
GcM3_008023 | GcM3_174011 | A0A420JAG7 | A0A420HPS2 | GPI ethanolamine phosphate transferase 3. | GPI ethanolamine phosphate transferase 2. | 0.478 |
GcM3_008023 | GcM3_175005 | A0A420JAG7 | A0A420HPG5 | GPI ethanolamine phosphate transferase 3. | GPI transamidase component GPI17. | 0.884 |
GcM3_008023 | GcM3_179014 | A0A420JAG7 | A0A420HN56 | GPI ethanolamine phosphate transferase 3. | Phosphatidylinositol glycan anchor biosynthesis class U protein. | 0.897 |
GcM3_008023 | GcM3_195008 | A0A420JAG7 | A0A420HGB9 | GPI ethanolamine phosphate transferase 3. | GPI ethanolamine phosphate transferase 2. | 0.478 |
GcM3_031019 | GcM3_007002 | A0A420J4T6 | A0A420JAM4 | 3-ketodihydrosphingosine reductase tsc10. | GPI transamidase component GPI16. | 0.905 |
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