STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GcM3_007008Pre-mRNA polyadenylation factor FIP1. (316 aa)    
Predicted Functional Partners:
GcM3_224015
Endoribonuclease YSH1.
    
 0.999
GcM3_222037
mRNA 3'-end-processing protein YTH1.
    
 0.999
GcM3_216010
mRNA cleavage and polyadenylation specificity factor complex subunit pta1.
    
 0.999
GcM3_093012
Polyadenylation factor subunit 2.
   
 0.999
GcM3_073005
Protein cft1.
   
 0.999
GcM3_030007
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.999
GcM3_128002
Putative rna-rbd.
    
 0.998
GcM3_212027
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.997
GcM3_090003
mRNA 3'-end-processing protein RNA14.
   
 0.997
GcM3_040021
WD repeat-containing protein 82.
   
 0.995
Your Current Organism:
Golovinomyces cichoracearum
NCBI taxonomy Id: 62708
Other names: Erysiphe cichoracearum, G. cichoracearum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.